Object-Oriented Database with Rule-Based Query Interface for Genomic Computation
نویسندگان
چکیده
A large amount of human genome data has been collected and efficient techniques for handling the data and for building and testing biological hypotheses are needed. We developed an object-oriented database system with rule-based query interface for genomic computation. The database is constructed on a commercially available object-oriented database system Gemstone and contains GenBank entries as complex objects. To handle complex objects in logical queries, concepts of meta variables and meta atoms are adopted in rule-based query interface. This system is powerful to construct database queries from simple keyword search to various biological hypothesis.
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